 |
Protein Structure Database
PSdb uses primary data, to relate secondary and tertiary information, for solvent accessibility, internal relative distances, and ligand interactions. Maintained at the Mellon Institute, Pittsburgh, Pennsylvania.
http://www.psc.edu/~deerfiel/PSdb/
Psc.edu ~
Site Info
Whois
Trace Route
RBL Check
|
 |
ZMM Software Inc.
Modeling tool for theoretical studies, employing molecular mechanics approach in combination with Monte Carlo energy minimization algorithm. Downloads on secure server, and contacts in Flamborough, Ontario.
http://www.zmmsoft.com/
Zmmsoft.com ~
Site Info
Whois
Trace Route
RBL Check
|
 |
SWISS-MODEL
SWISS-MODEL is an Automated Protein Modelling Server running at the GlaxoWellcome Experimental Research in Geneva, Switzerland.
http://swissmodel.expasy.org//SWISS-MODEL.html
Expasy.org ~
Site Info
Whois
Trace Route
RBL Check
|
 |
Genoscience
Genmol is a 3D molecular modeling software for measuring resistance/affinity between a ligand and a target, used for disease management and drug discovery. Details of company in Marseille, France.
http://www.3dgenoscience.com/
3dgenoscience.com ~
Site Info
Whois
Trace Route
RBL Check
|
 |
Ghemical
An easy-to-use molecular editor and modeling package with all-atoms molecular mechanics, reduced protein models and links to many common chemistry programs. Ghemical is released under the GNU GPL and includes source code.
http://www.uku.fi/~thassine/projects/ghemical/
Uku.fi ~
Site Info
Whois
Trace Route
RBL Check
|
 |
Gromacs
A molecular dynamics package primarily designed for biomolecular systems such as proteins and lipids. It is a free software.
http://www.gromacs.org/
Gromacs.org ~
Site Info
Whois
Trace Route
RBL Check
|
 |
CHARMM
A program for macromolecular dynamics and mechanics. It performs standard molecular dynamics in many different ensembles (e.g., NVE, NVT, NPT) using state-of-the-art algorithms for timestepping, long range force calculation and periodic images.
http://brooks.chem.lsa.umich.edu/charmm_docs/TSRI_docs-list.htm
Umich.edu ~
Site Info
Whois
Trace Route
RBL Check
|
 |
Bioinformatics Tools
Sequence analysis tools including protein classification with the assistance of predicted secondary structure and sequence format tools, available from the Molecular Biology Program at New Mexico State University.
http://darwin.nmsu.edu/molb_resources/bioinformatics/
Nmsu.edu ~
Site Info
Whois
Trace Route
RBL Check
|
 |
BioAdviser
Package for displaying, analyzing, and manipulating 3D structures of biological macromolecules, with special emphasis on the study of proteins and enzymes. Includes links to other products by FQS Poland, in Krakow.
http://www.fqs.pl/life_science/bioadviser
Fqs.pl ~
Site Info
Whois
Trace Route
RBL Check
|
|
|
|
